Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015888040.1_cds_XP_016442566.1_37816
CDS Infomation

[gene=LOC107767978] [db_xref=GeneID:107767978] [protein=protein spinster homolog 3-like] [protein_id=XP_016442566.1] [location=complement(join(10970..11486,11876..12627,13211..13498))] [gbkey=CDS]
Sequence

ATGAAGGCAGAAACACTAACACTGGTGCTGGTGAACTTAGCGGGAATAATGGAAAGGGCG
GATGAATCATTGTTACCTGGTGTTTATAAGGAAGTTGGTGAAGCACTCCATGCTGATCCA
ACGAGGTTGGGCTCGCTCACGCTTTTCCGATCCATGGTTCAGTCCCTGTGTTATCCTCTT
GCTGCTTACTTAGCTGCTCGCCATAACCGGGCCCATGTCATCGCCTATGGTGCTTTTCTT
TGGGCTGCCGCCACTTTCCTCGTCGCTTTCTCCTCTACCTTCTCTCAGGTGGCAGTATCG
AGAGCTTTAAATGGGATAGGCCTAGCCATAGTTGCACCTGCTATTCAATCTCTTGTAGCT
GACTCGACTGATGATGACAAACGTGGGATGGCATTTGGATGGCTACAGCTTACTAGCAAT
ATTGGTTCGATAATTGGTGGATTGTTCTCCTTAATGATAGCGCGTGTTACTTTTTTGGGA
ATTCCTGGTTGGAGGCTCGCATTTCATCTTGTTGGGATCGTCAGCGTTATCATTGGTATT
TTGGTTCGCTTATTTGCTAATGATCCTCACTTTCCAGATGGCCGTCTAAAGGCTACTAAT
GAAGGTCATGGTAAATCCTTCATATCGGAAGTGCAAGGTCTCGTTCAAGAAGCAAAATCG
GTCATAAAGATTCAATCTTTCCAGATTATTGTTGCTCAAGGTGTTACTGGTTCTTTTCCC
TGGTCAGCTTTGTCCTTTGCTCCAATGTGGTTAGAGCTTACTGGACTTTCCCATGAGAAG
ACTGCTGTACTTATTGGCTTGTTTGTGATTGGAAGTTCCATAGGAGGACTCTTTGGAGGA
AGGATGGGAGACATGTTATCCCGGCGTCTACCAAATTGTGGCAGGATAATCCTGGCACAA
ATAAGTTCAGCTTCAGCGATTCCCCTATCGGCGATCCTTCTGCTGGCTTTGCCTGATGAT
CCTTCCTCAGTATTCGCGCATGGTCTGGTCCTGTTTATTACAGGGTTCTTCATATCTTGG
AATGCTCCAGCTACAAACAATCCAATTTTTGCAGAGATAGTGCCTGATAAATCAAGAACA
AGTATCTATGCTCTGGACCGATCATTTGAATCTGTACTATCGTCTTTTGCTCCACCTGTT
GTTGGACTACTGGCTCAGAATGTTTACGGTTATAAACCAGTTCCTGAAGGTGTTGAAAAT
ATTGCTACAGACAGAGGAAACGCCAAAGCTTTGGCACAAGCGTTGTTCACTTCCATAGGA
ACTCCAGTGGCACTATGCTGTGTGATTTACTCTTTTCTCTATTGCACGTATCCAAGGGAT
AAGGAGCGGGCTCAAATGGAAGCACTGATAGAATCAGAGATGCAAATCATGGGCTTGGAT
ACGTCTCCTGCAACTCGACAATATTCACAAGTCGAGTCATCTGAAACCCAAGAGCATCTT
GAAGACAGAATCATTGTTGAAATGGATTATGGGGAAGATGGACTTGATTTTGATGATGAT
GATGATGAGAAGACATTAGTCCACCACTACCCGACATTTCCTCAACTGGATCGATAG

Peptide Sequence

PEP ID

XP_016442566.1
PEP Infomation

PREDICTED: protein spinster homolog 3-like [Nicotiana tabacum]
Sequence

MKAETLTLVLVNLAGIMERADESLLPGVYKEVGEALHADPTRLGSLTLFRSMVQSLCYPL
AAYLAARHNRAHVIAYGAFLWAAATFLVAFSSTFSQVAVSRALNGIGLAIVAPAIQSLVA
DSTDDDKRGMAFGWLQLTSNIGSIIGGLFSLMIARVTFLGIPGWRLAFHLVGIVSVIIGI
LVRLFANDPHFPDGRLKATNEGHGKSFISEVQGLVQEAKSVIKIQSFQIIVAQGVTGSFP
WSALSFAPMWLELTGLSHEKTAVLIGLFVIGSSIGGLFGGRMGDMLSRRLPNCGRIILAQ
ISSASAIPLSAILLLALPDDPSSVFAHGLVLFITGFFISWNAPATNNPIFAEIVPDKSRT
SIYALDRSFESVLSSFAPPVVGLLAQNVYGYKPVPEGVENIATDRGNAKALAQALFTSIG
TPVALCCVIYSFLYCTYPRDKERAQMEALIESEMQIMGLDTSPATRQYSQVESSETQEHL
EDRIIVEMDYGEDGLDFDDDDDEKTLVHHYPTFPQLDR

Transcript Sequence

Gene sequence data has not been registered.